BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F04SP1|AL428579
(325 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1544 636 0.0
>3x_Contig1544
Length = 10626
Score = 636 bits (319), Expect = 0.0
Identities = 321/323 (99%)
Strand = Plus / Minus
Query: 1 gacatatgasatgttcatctttttaagtgcaaatatctgtgaacggcctagtaaagttga 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9875 gacatatgagatgttcatctttttaagtgcaaatatctgtgaacggcctagtaaagttga 9816
Query: 61 taacgatacatctttggtcttgtactatacttthaactctaacgacactgggaccttcac 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 9815 taacgatacatctttggtcttgtactatacttttaactctaacgacactgggaccttcac 9756
Query: 121 cactgcaaagagttctacatttgacgatgggtatttggaagctttggccttaagaccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9755 cactgcaaagagttctacatttgacgatgggtatttggaagctttggccttaagaccata 9696
Query: 181 ttatactgacgactcttcgctgaataatggcacgtattccacgttgtatctgatggtcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9695 ttatactgacgactcttcgctgaataatggcacgtattccacgttgtatctgatggtcca 9636
Query: 241 gttggttaatagcaccactggtcagccatttgaatcggatggtagtacaattgcagatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9635 gttggttaatagcaccactggtcagccatttgaatcggatggtagtacaattgcagatga 9576
Query: 301 tgatgagcggtggtcgtaccaga 323
|||||||||||||||||||||||
Sbjct: 9575 tgatgagcggtggtcgtaccaga 9553
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2214
Number of Sequences: 1807
Number of extensions: 2214
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 325
length of database: 10,358,551
effective HSP length: 15
effective length of query: 310
effective length of database: 10,331,446
effective search space: 3202748260
effective search space used: 3202748260
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.2 bits)